Browse of TCMCG006C00457 protein

CDS

Accession Number	TCMCG006C00457
gbkey	CDS
Protein Id	XP_022576183.1
Location	complement(join(247334..247941,248028..248393,248486..249557,249652..249947,250023..250101,250215..250302,250453..250570,250683..250860,250979..251055,251576..252839,253030..253172,253253..253301,253377..253590,253749..253808,254101..254412,254533..254611,254965..255044,255128..255205,255351..255428,255503..255590,255677..255763,255837..255976,256048..256121,256263..256286))
Gene	LOC106345752
GeneID	106345752
Organism	Brassica napus

Protein

Length	1883aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022720462.1
Definition	mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTCTTCAGAATTGGGGGTCTTCATCACGTTTCTTGGTTTCAGTTTCTTCCCAGTGAAGCTGAGCTCAATCCCACCTCTGATACAAGTTCAAGAGCTGAGCAGAATGACGTTGCAACATATCTTGTGCTTTCATCTCATCTGCGCTTGCAGAAGGAAGGCTTTCTTAGCACATGGACCAATTCTTTCGTTGGACCTTGGGATCCATCTCAAGGCTTATACAACCCTGATGAGAAGATCAAGCTTTGGCTTTTTCTTCCTGGACGTCATTCATCAATCACTGATAAAGCTCAGGCTGCTGTCTCAAAGCTTAGAGTTGTTGCGTCAGGAATCTGGGTAGCACCTGGGGACTCCGAGGAGATATCTGTTGCCTTTTCACAGTCTTTGCGTAATTGCATTGAAAGAGCGTTAAGTGGACTTTCTTACATGAGATTTGGAGATGTGTTTTCAAAAGTCAGCCCTCAAAATGAAGAATATTTGAGGAGGGGCCGTCTTACTGTTGAATTCGTTTTTGCTGCTACCGAAGAGGCAGTTTTTGTCCATGTCATTGTTTCTGCCAAGAATGTACGGACACTTTCAAGTGGCGATGCTGAGAGGCTGTCAAGGAGTTCCTTGAAAAACTCCAGTTATAGGCTTCCAGTGATTGTTTCTCCTCATGGAATGCGGGGTAGCCTCACTGGATTCTGTCCCAATGACCTTGTCAAGCAAGTCTACTTCAGTTCTGGAAACTTAAGGTCTTCAAGTGGGTATATTGGCCTCCCTCCTCATGCTGGTAGTGGGTCCCGTCTGATAAATGGCGATCATTGTTACGTGGAAGTTACACTTGGTTGCTGCCAAAATATAAATGACAACACAAGTCAAACTAATTCAACCTTTGCGGTGAATGTTCCTCAAACATCAGTTGGGAGTAAAGATCACCGGAAAGGACACCCAGATATAGCATCGATGTGTGAAAAAAAGTTCATATATCCAGCTGAGGCCGTGCTTGTGCCAATTTTACAGTCGGCATTTGCTAAATTTTCTTTGAAAAGATTTTGGCTTCAAAACTGGATAGGACCATCTCTAGCAGGCTCATCGTTATTTATGCACTGGGCTGGTGATTTTGACTTCTTTGGATCGTCTGGAAATAAGAGTGATGGGTTCTTTGAAAAAAATGGCTATAATAGCAGTGGCAGTAGCGGTAATAGCAGCATTAGTTCAACAAGTAGTGCTTCTAGTGGGAGTGGTTGGAGAATGACTTCAAGAACTGGTGACCTTGATGCGGATGCAGATTCTTTGACTTGTAATGATGATCACCCAAAATTGGGTTCCAAGCGGCCGCGAACAGGGATGGCAGAGTCATTCGGTCAAGTAGGTACTGCAAATGATCAATTTGGTTGGGATTGGGATGATGACGATGATGATGATAGAGGAGTTGGCATGGATATCCAAGCACTTCTTTCAGAGTTTGGAGACTTTGGTGACTTCTTTGAGAATGATGCGTTACCTTTTGGCGAGCCGCCGGGAACAGCAGAGTCGCATTCCCTCATACTTCCTTCAGATTCTGCTGATGTAGGTTCTAGTCCAATGGATACGATGGATGTATCAGACCAGATTGTGTTGCCCGTTGGGTTTTCGTCTTTTGAGAGCTTCAATCCTGCTCCCCCTATCATTGATGAAGGCCTTATCAAAAGTCAAGAAGTCCTCAACAACAGTGTCACTTCAGTTTCAGCTCCTTCTAATCAAATGTTAAGCTCTTCTAACAGTGAGTTCGATCATTTGATGAAAGCAGAAGCTATGATGACCTTTGCTCCTGAGTATGGAGCTGTTGAAGCACCTATGAGCGAGATTTCTTCGACGTCTTTCAAAAGCCCATATCTTCCCAAATCTCATAAAGTGGAGAGTTCAAATTCAAGAACGAGTAGCTATGTTTATGGACCCACCCCACCTGCCACTGATTCTGATGGAGCAGTCGATAAGATTTTGCTTGGATCAAAAGCATACATTGGTAATGATGGCAGAACTTTGTACACTAAGGTAGAGGGCAGAAAGGGCCGGTATGATAAGCTACCTACTTTAATCAGTGACAACAATAGTAAAAAGGAGGGTGTGTCTCAGTTAAAATATTCAAACTACAATGCTTCTAGTGCTGTTAAGATCGTACAGGGGAAAAAGACTGACGGTATATCTGCTGTTGTTAGTACTTTATTATCTTCAAAGACCTTGCTGGCAACAGACGTGGGAAGCGTTATGTTCCAAGCCTTCATGTATAGGATGCGGCACAAAGCCATTTCTTCGAAGCACAGTTCTCCTGTTAGTCTGAGTAGGCTTAGTGGAAACTTCTTCCTGAACCAGGTGCCAAATGAGCCAAGTAGTCTGACAGACAACGTATCTGGAAGGAACGAGATATATAAGAAAGAAGTACCTACTAGAATAGCTGGAGATTTCGATGGAGGAATGTTAGACAGCCACATGAGTGCACCAGTTGGCGTGTGGCGGACTGTTTCAGTCCCAAAAACAGCAAAACCTGCTAGCTCGCCAAACATTGAAGCAGGCTCATCCTTGCCCCATAGTTCATTTAGCGAAAACAGTTTGCTTTCTTATGGACAAAGGCAGCCATTGCAGGAGCTTCTAGATGGAATAGCGCTACTTGTACAGCAAGCTACTTCTTTCGTTGATTTAGCTCTGGATTCAGATTGTGGGGATGGACCTTATGGCTGGCTTGCACTGGAAGAGTTGTGGAGACGGGAACTGTCGTGTGGACCCTCTGCTGGCCATGCAGGCTCTGGGGGAACTTTGGCTTCCTGCCATTCTCTGGACATTGCTGGTGTCAAGCTAGTTGACCCACTCTCTGCTGAGGTTTTTCCTTCCTCTGTCATTACTCTACTGCAATCTGACATCAAGACAGCTCTGAAATCCGCATTTGGTCAGTCAGACGGCCCATTATATGTCACAGATTGGTGCAAGGGCCGAAATCAATCGATGGATGGAGTATCTATTTCCGAGGGATCTACTGCCGAGTCAGTCCTGAGTGAAGTGTCAAATGCAATAGATGGTGGGAAAGGAGAGGAGTCTGCTCAGAGCCAAGATATATACAGTTCAGAGTTACTCCGACCTACACTTTTTGTTCTTCCATCACCCTCTATACTTGTCGGATACCAAGATGACTGGCTTAAGGTTTCAACCAACTCCTTGCCACATTGGGAAAAGGCCCCTTTCGAGCCATATGCTTTGCCGAAAAATATGAACTATACTGTTGTATGCCCGGATATAGATCCTTTAACCAGTGCTGCTGTTGATTTCTTCCAACAACTTGGAACTGTTTATGAAACGTGCAGACTGGGAACCCATTTGCCACAGATCCTAGGAAATCAAATGGAAACTGACGCTGGAAGATTATCCTCGTCAGGATTTGTTCTGCTTGATTGCCCTCAATCGATGAAGATTGAAAGCAATAACACGTCGCTTCTGGGATCTCTCAGTGATTATTTTCTCTCCTTGTCGAATGGGTGGAATGTAAATAGCTATCTGAAGTCTTTGTCAAAAGCGCTGAAAGGTCTTAAGCTTGGGTCTGGGCTTTACACAAACCAGAAAGAAGGGTCAGCTACTCCATGCATGGTAGTGTACATAGTGTGTCCATTTCCCGACCCTTCGGCAGTTTTAAGGACAGTCGTTGAATCGTCTATAGCACTTGGATCAGGGATAAAGCCAGATAGAGACAGGAGATCGTTACTTAATAGTCAGGTTGCAAGGGCATTTGGTAGTTCTGCTGCTGTAGACGAAGCATCAATATCTCACATTCCAGTGCTTTCGGGGTTTAGCGTCCCTAAGCTAGTTCTACAAGTGGTGTCTGTTGATTCTATTTTCCGGATAACAAGTCCAAGCTTTAATGAGCTTGTCATCCTCAAGGATACTGCCTTTTCTGTCTACAATAAAGCTCGGCGAATTTCAAGAGGAATGCCTAATGATGCATTTCTCTCATCATCATTATCTAACAGATCCTCTTCAGCCTTGGCTTCAGTGAATTCTATCTCAGGAATCTGGAAAGACTGCGTCAGTTCTCGAATGACAGGTTCTACACATCCAAGAGATGGTGATATTGATGGTAGCATTAGAACGAGTAGTTGGGATAGTAGCTGGCAAATAACAAGATCTGGAGGAGTAAGCTGCGACTCAAACAGAAATGGAGATTTTTACATTAATGAGGAAATTTTCTATCTATTTGAACCGCTTTTCATCCTTTCCGAGCCTGGTTCCGTGGATCGTGGAGTTTCACCTACTTTCGGCGGCTTAGGATCCGAGTCTTCAAAGCCAATACCTGAGGATGGTGGCAGAGGTTCAGGACTTGGCGTCAATTCAATGGAAGGTACAAGCTCCCAGGGGGATGCATCACAGGTTGAAGGGAAGGCTGTTCCAAGCTTACATTGCTGCTACGGTTGGACAGAGGACTGGAGATGGCTTGTAAGCATCTGGACTGACGCCAGGGGTGAATTGCTTGACACACATATATTCCCCTTTGGTGGGATTAGCAGTAGACAGGATACGAAAGGGCTGCAGTGTCTTTTTGTTCAAGTTCTGCAGCAGGGATGTCAGATACTACAGGCATGTTCCTCCCCTGACAGTGGATCTTTCAAACCCAGGGATTTTGTCATTACACGCATTGGGAGTTTCTTTGAGCTTGAGTACCTAGAGTGGCAAAAGGCAATTTACACAGCTGGAGGTCCTGAGATTAAGAAGTGGCCTATTCAACTTCGACGTTCTGCACCTTCTGGCGTAGCCACCAATAGCAACGGACCTTCCTTGCAACAGCATGATCTGAGTTTGATTCAGGAGAGAGCCTCGTCAACTAGCACACTCTATGGCTCTCACTCAAAACCATCCACCTTTGTGAAAGGCGGTATGGGGCACTCTGCTGGAAGAAAGCAAACAATGGGTGGACAAACCATTTCTGGTACTCCAAGGGGTTTGTTTCAGTGGGTTCACAGCATCAGTTTTGCTTCTATTTCACTTGATCATTCTCTGCATTTTGTTCTTCCGGCTGAGTTGGTATCTCCTGGAGGTGGCCAGAGCAGTACTGGTATGAGTGCAGCAAATTACATTGAAGGTTTCACTCCAGTCAAGTCTCTTGGGTCAACGGCTTTCTCTTACATGATGATACCATCACCCAACATGCGCTTTCTTCACCCAAGTCCTCTTCAGCTTCCCACATGTTTAACTGCAGAATCACCTCCACTTGCTCACCTCCTTCACAGCAAAGGCTGTGCAATCCCCTTGTCTACCGGATTTGTTGTTTCAAAAGCTGTGCCTTCCATGAGAAAAGACTCGCGAATAAACGTGAAAGAAGAATGGCCATCAGTTCTCTCTGTAAGTCTCATAGACTATTATGGTGGTTATGACAACGCTCATGACAAAGTTCTTCAAGGAATCATGAAGCAAGGCGGTGGAGGGACCAAAGAAACTAGAGATTTTGAGGTTGAAAGCCATCTAATCCTTGAGTCAATTGCAGCAGAACTCCATGCTCTATCGTGGATGACTGTTAGTCCAGCATATCTGGATAGGCGGACTGCATTGCCATCTCACTGTGATGTGGTTCTCAGACTGAGTCGTCTGCTTCATTTTGCGGATAAAGAACGCTCCAGGCTACCAGATAAGTCGGGAGTTTGA

Protein:   MWTNVFRIGGLHHVSWFQFLPSEAELNPTSDTSSRAEQNDVATYLVLSSHLRLQKEGFLSTWTNSFVGPWDPSQGLYNPDEKIKLWLFLPGRHSSITDKAQAAVSKLRVVASGIWVAPGDSEEISVAFSQSLRNCIERALSGLSYMRFGDVFSKVSPQNEEYLRRGRLTVEFVFAATEEAVFVHVIVSAKNVRTLSSGDAERLSRSSLKNSSYRLPVIVSPHGMRGSLTGFCPNDLVKQVYFSSGNLRSSSGYIGLPPHAGSGSRLINGDHCYVEVTLGCCQNINDNTSQTNSTFAVNVPQTSVGSKDHRKGHPDIASMCEKKFIYPAEAVLVPILQSAFAKFSLKRFWLQNWIGPSLAGSSLFMHWAGDFDFFGSSGNKSDGFFEKNGYNSSGSSGNSSISSTSSASSGSGWRMTSRTGDLDADADSLTCNDDHPKLGSKRPRTGMAESFGQVGTANDQFGWDWDDDDDDDRGVGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESHSLILPSDSADVGSSPMDTMDVSDQIVLPVGFSSFESFNPAPPIIDEGLIKSQEVLNNSVTSVSAPSNQMLSSSNSEFDHLMKAEAMMTFAPEYGAVEAPMSEISSTSFKSPYLPKSHKVESSNSRTSSYVYGPTPPATDSDGAVDKILLGSKAYIGNDGRTLYTKVEGRKGRYDKLPTLISDNNSKKEGVSQLKYSNYNASSAVKIVQGKKTDGISAVVSTLLSSKTLLATDVGSVMFQAFMYRMRHKAISSKHSSPVSLSRLSGNFFLNQVPNEPSSLTDNVSGRNEIYKKEVPTRIAGDFDGGMLDSHMSAPVGVWRTVSVPKTAKPASSPNIEAGSSLPHSSFSENSLLSYGQRQPLQELLDGIALLVQQATSFVDLALDSDCGDGPYGWLALEELWRRELSCGPSAGHAGSGGTLASCHSLDIAGVKLVDPLSAEVFPSSVITLLQSDIKTALKSAFGQSDGPLYVTDWCKGRNQSMDGVSISEGSTAESVLSEVSNAIDGGKGEESAQSQDIYSSELLRPTLFVLPSPSILVGYQDDWLKVSTNSLPHWEKAPFEPYALPKNMNYTVVCPDIDPLTSAAVDFFQQLGTVYETCRLGTHLPQILGNQMETDAGRLSSSGFVLLDCPQSMKIESNNTSLLGSLSDYFLSLSNGWNVNSYLKSLSKALKGLKLGSGLYTNQKEGSATPCMVVYIVCPFPDPSAVLRTVVESSIALGSGIKPDRDRRSLLNSQVARAFGSSAAVDEASISHIPVLSGFSVPKLVLQVVSVDSIFRITSPSFNELVILKDTAFSVYNKARRISRGMPNDAFLSSSLSNRSSSALASVNSISGIWKDCVSSRMTGSTHPRDGDIDGSIRTSSWDSSWQITRSGGVSCDSNRNGDFYINEEIFYLFEPLFILSEPGSVDRGVSPTFGGLGSESSKPIPEDGGRGSGLGVNSMEGTSSQGDASQVEGKAVPSLHCCYGWTEDWRWLVSIWTDARGELLDTHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDSGSFKPRDFVITRIGSFFELEYLEWQKAIYTAGGPEIKKWPIQLRRSAPSGVATNSNGPSLQQHDLSLIQERASSTSTLYGSHSKPSTFVKGGMGHSAGRKQTMGGQTISGTPRGLFQWVHSISFASISLDHSLHFVLPAELVSPGGGQSSTGMSAANYIEGFTPVKSLGSTAFSYMMIPSPNMRFLHPSPLQLPTCLTAESPPLAHLLHSKGCAIPLSTGFVVSKAVPSMRKDSRINVKEEWPSVLSVSLIDYYGGYDNAHDKVLQGIMKQGGGGTKETRDFEVESHLILESIAAELHALSWMTVSPAYLDRRTALPSHCDVVLRLSRLLHFADKERSRLPDKSGV